Interpreting Liver Function Tests: Patterns, Causes and Emergencies
Interpreting Liver Function Tests (LFTs): Patterns, Causes, Algorithms and Emergency Findings Study level: Clinical medicine, emergency medicine and clinical chemistry | Topic: Liver tests Core concept: A “liver function test” panel contains markers of hepatocellular injury, cholestasis and synthetic function. ALT/AST show injury, ALP/GGT suggest cholestasis, bilirubin describes excretory handling, and albumin/INR reflect synthetic function (with important non-liver influences). Interpret the pattern, severity, trend and patient—not an isolated number. Learning objectives Identify what each common liver panel test measures and what it cannot prove. Classify results as hepatocellular, cholestatic or mixed using the R-ratio concept. Interpret bilirubin, albumin, INR, ALP, GGT, ALT and AST together. Build a stepwise differential and investigation plan. Recognise acute liver failure, cholangitis, severe drug injury and other emergencies. 1. The liver panel: injury versus function Test What it reflects Important limitations ALT Leakage from hepatocytes; relatively liver-specific. Can rise in muscle/other disease; magnitude does not equal functional failure. AST Hepatocyte and muscle injury; mitochondrial and cytosolic enzyme. Less liver-specific; also rises in skeletal/cardiac muscle and haemolysis. ALP Bile-duct/ductular injury and cholestasis; also bone, placenta and intestine. Physiologically higher in children, pregnancy and healing bone. GGT Supports hepatobiliary source of an elevated ALP; inducible enzyme. Alcohol and many drugs raise it; isolated GGT is nonspecific. 5′-nucleotidase Alternative confirmation of hepatic ALP source. Less available; does not identify the exact cause. Total/direct bilirubin Heme breakdown, hepatic uptake/conjugation and biliary excretion. Fractionation is essential; haemolysis and fasting also alter levels. Albumin Longer-term hepatic protein synthesis and nutrition/inflammation. Long half-life; low in renal/GI loss, inflammation and malnutrition. PT/INR Short half-life clotting-factor synthesis and vitamin K status. Also altered by warfarin, vitamin K deficiency, DIC and anticoagulants. Total protein/platelets Globulins and portal-hypertension/marrow clues. Supportive, not specific. 2. Classify the biochemical pattern 2.1 R-ratio Use the upper limit of normal (ULN) for the laboratory: R = (ALT ÷ ALT ULN) ÷ (ALP ÷ ALP ULN) Hepatocellular: R ≥5; ALT/AST predominate. Mixed: R >2 and <5. Cholestatic: R ≤2; ALP/GGT and often bilirubin predominate. Patterns can evolve. In severe hepatocellular injury, aminotransferases may fall as hepatocytes are lost while INR/bilirubin worsen; a falling ALT is not automatically recovery. 3. Hepatocellular pattern 3.1 Common causes Cause Clues Initial tests Viral hepatitis Exposure, fever, malaise, jaundice, very high ALT/AST. HAV IgM, HBsAg/anti-HBc IgM, HCV antibody/RNA; HEV where relevant. Drug-induced liver injury (DILI) New medicine, supplement or dose change; variable latency. Full medication timeline, exclusion of viral/autoimmune/obstructive causes. Ischemic/hypoxic hepatitis Shock, hypoxia, cardiac failure; abrupt very high AST/ALT and LDH. Haemodynamics, lactate, LDH, ECG/echo and renal tests. Autoimmune hepatitis Female predominance, other autoimmunity, high IgG. ANA, ASMA, anti-LKM where appropriate, IgG and specialist assessment. Metabolic fatty liver/MASH Obesity, diabetes, dyslipidaemia; mild chronic ALT elevation. Metabolic profile, ultrasound/elasticity and fibrosis risk assessment. Wilson disease Young patient, neuropsychiatric symptoms, haemolysis or acute liver failure. Ceruloplasmin, urinary copper, slit-lamp exam and specialist testing. Muscle injury Myalgia, weakness, trauma, seizures or strenuous exercise; AST often prominent. Creatine kinase, renal function and urine. 3.2 AST:ALT ratio An AST:ALT ratio above about 2 supports alcohol-associated liver disease in the right context, but it is neither sensitive nor specific. AST predominance also occurs in cirrhosis, muscle injury and advanced mitochondrial injury. 4. Cholestatic pattern 4.1 Intrahepatic versus extrahepatic Extrahepatic obstruction: gallstones, pancreatic/ampullary cancer, biliary stricture, cholangitis or postoperative injury. Intrahepatic cholestasis: sepsis, drug injury, primary biliary cholangitis, primary sclerosing cholangitis, infiltrative disease, pregnancy-related cholestasis. 4.2 Diagnostic sequence Confirm hepatic source of ALP with GGT or 5′-nucleotidase and repeat if unexpected. Ask about jaundice, pale stool, dark urine, itch, fever, RUQ pain, drug exposure and inflammatory bowel disease. Perform ultrasound first in many settings to assess ducts, gallstones, liver texture and portal flow. If ducts are dilated, escalate to MRCP/CT/endoscopic assessment and urgent intervention when cholangitis/obstruction is likely. If ducts are not dilated, consider autoimmune cholestatic disease, DILI, sepsis, infiltrative disease and pregnancy-related causes. 4.3 Cholangitis emergency Fever/rigors, RUQ pain and jaundice suggest ascending cholangitis; hypotension and altered mental state indicate severe disease. Start sepsis management, cultures and antibiotics per local protocol, urgent imaging and biliary drainage consultation. 5. Bilirubin interpretation Pattern Mechanism Examples Unconjugated predominant Overproduction or impaired conjugation. Haemolysis, Gilbert syndrome, neonatal physiology, ineffective erythropoiesis. Conjugated predominant Hepatocyte excretion failure or obstruction. Hepatitis, cholestasis, obstruction, sepsis, drug injury. Mixed Combined hepatocellular and biliary dysfunction. Severe hepatitis, advanced cirrhosis and mixed DILI. Urine bilirubin is present when conjugated bilirubin is water-soluble. Dark urine with pale stools and itch suggests cholestasis, whereas isolated unconjugated hyperbilirubinaemia without liver injury suggests haemolysis or impaired conjugation. 6. Synthetic function and severity INR/PT: rises quickly when clotting-factor synthesis is impaired. An unexpectedly prolonged INR may also reflect vitamin K deficiency, warfarin, DIC or anticoagulant contamination. Albumin: low albumin suggests chronic disease or nonhepatic loss; normal albumin does not exclude acute liver failure. Glucose: hypoglycaemia is a severe hepatic failure warning, especially with encephalopathy. Ammonia: may support encephalopathy assessment but correlates imperfectly with severity; treat the patient, not the number alone. Platelets/spleen: thrombocytopenia and splenomegaly support portal hypertension but have many other causes. 7. Acute liver failure: emergency recognition Acute liver failure is rapid severe hepatic injury with coagulopathy and encephalopathy in a person without established cirrhosis. It requires urgent specialist/transplant-centre discussion. Jaundice plus confusion, asterixis, drowsiness or coma. Rising INR/PT, hypoglycaemia, metabolic acidosis, renal injury or lactate elevation. Very high aminotransferases from acetaminophen/toxin, viral hepatitis or ischemia; the cause may be clinically silent initially. Urgent actions: ABCDE, bedside glucose, stop hepatotoxic drugs, contact a liver unit, test for acetaminophen and viral/autoimmune causes, manage cerebral oedema/sepsis/renal failure and avoid unnecessary procedures. 8. Interpreting common combinations Pattern Likely considerations Next step ALT/AST high, ALP mild, bilirubin variable Hepatitis, ischemia, DILI, autoimmune hepatitis, muscle injury. Repeat/trend, medication and exposure history, viral/autoimmune tests, CK and ultrasound. ALP/GGT high with direct bilirubin Obstruction, cholangitis, cholestatic DILI, PBC/PSC. Ultrasound, urgent assessment if pain/fever, cholangiography when indicated. Isolated ALP high, GGT normal Bone growth/disease, fracture, vitamin D disorders, pregnancy. Bone-specific ALP/other tests and clinical evaluation. Isolated GGT high Alcohol, enzyme-inducing drugs, metabolic disease.

